I've never bothered to ferment the seeds because they aren't surrounded by gel. I don't need many so I just pick the seed out from amongst the flesh with the tip of a paring knife and let the seed dry on a paper plate. If you need a lot I bet you could whirl the entire fruit(s) along with some water in a blender and then strain the seed out.
Of course the fermentation process may help kill pathogens.
Ginny
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